CDS

Accession Number TCMCG066C02614
gbkey CDS
Protein Id XP_034600075.1
Location complement(join(30060241..30060342,30060579..30060683,30060995..30061093,30061277..30061436,30061523..30061600,30061749..30061890,30062004..30062148,30062241..30062303,30062393..30062452,30062690..30062767,30062847..30062921,30063049..30063165,30063504..30063734,30063810..30063929,30064023..30064099,30064181..30064281,30064356..30064462,30064609..30064766,30064899..30065121))
Gene LOC117860799
GeneID 117860799
Organism Setaria viridis

Protein

Length 746aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034744184.1
Definition 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category I
Description GcpE protein
KEGG_TC -
KEGG_Module M00096        [VIEW IN KEGG]
KEGG_Reaction R08689        [VIEW IN KEGG]
R10859        [VIEW IN KEGG]
KEGG_rclass RC01486        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K03526        [VIEW IN KEGG]
EC 1.17.7.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.17.7.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006081        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006090        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016725        [VIEW IN EMBL-EBI]
GO:0019288        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019682        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046429        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0052592        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCACCGGCGTGGCACCAGCCCCTCTCCCACATGTCAGGGTGCGCGATGGTGGCATCGGCTTCACCAGGAGCGTCGACTTTGCTAAGGTCTTGTCTGTTCCTGGCGTCGGAACTACAAGGACAGGCTCCTCGAGGGGCAGGGCGCTTGTGGTGAAGTGCTCGAGTACTGGTTCAGATACTATGGAGCTGGAGCCATCATCAGAAGGAAGCCCACTTTTAGTCCCCAGGCAAAAGTACTGTGAATCTATACACCAGACAAGGAGAAGAAAAACTCGTACTGTAATGGTGGGGAATGTCCCACTCGGTAGTGATCATCCCATAAGGATTCAGACCATGACGACTTCAGATACCAAGGATGTTGCCAAAACTGTAGAAGAGGTGATGAGGATAGCAGATAAAGGAGCTGATATTGTTAGAATAACCGTCCAGGGTAAGAAGGAGGCTGATGCCTGCTTTGAGATCAAGAACACCCTGGTTCAGAAGAATTACAACATTCCACTAGTAGCCGATATTCATTTTGCTCCTACGGTAGCTTTAAGAGTGGCAGAATGCTTTGACAAAATTCGTGTGAACCCCGGAAATTTTGCTGATCGTCGGGCTCAGTTTGAGCAGCTGGAATATACAGATGACGATTACCAAAAAGAGCTTGAGCATATTGAGAAGGTATTTTCTCCATTAGTTGAGAAATGCAAGCAGTATGGGAGAGCAATGCGCATAGGAACAAATCATGGAAGTCTCTCTGACCGCATAATGAGTTACTATGGTGATTCTCCACGGGGAATGGTTGAGTCTGCTTTGGAATTTGCTAGGATATGTCGGAAGTTGGACTTTCACAACTTTGTATTTTCAATGAAAGCTAGTAACCCTGTTGTCATGGTCCAAGCATATCGCCTGCTTGTTGCAGAAATGTATAACCTAGGATGGGATTATCCCTTGCACTTGGGTGTTACCGAAGCTGGAGAGGGTGAAGATGGAAGGATGAAGTCTGCTATTGGCATTGGAACACTTCTAATGGATGGCTTGGGTGACACAATCCGTGTCTCCCTCACGGAACCACCAGAAGAAGAGATCGATCCTTGCCAAAGGTTGGCAAATCTTGGGACACAGGCTGCCAACCTTCAAATCGGAGTGGCCCCATTTGAAGAAAAGCACAGGCATTATTTTGATTTCCAGCGTAGGAGTGGTCAATTGCCTTTGCAGAAGGAGGGTGAGGAAGTTGACTACAGAAATGTCCTGCATCGTGATGGCTCTGTACTGATGTCAGTTTCCTTGGATCAGTTGAAGGCTCCTGAGCTCCTTTATAGGTCTCTTGCAACGAAGCTTGTGGTTGGCATGCCTTTCAAGGACCTTGCTACTGTAGATTCCATTCTTTTGAGGGAGCTCCCCCCTGTAGAAGATACTGAAGCTAGGCTTGCACTTAAAAGATTAGTTGACATCAGCATGGGCGTGTTGACCCCTTTATCGGAGCAGTTGACAAAGCCACTCCCACATGCAATTGCGCTTGTCAACCTTGACGAACTGTCAAGTGGTGCTCACAAACTTTTGCCAGAAGGCACCAGACTTGCTGTCACTATTCGCGGAGATGAATCGTACGAGCAGCTAGATATCCTTAAGGGTGTTGATGATATAACAATGCTGCTACATAATGTTCCATATGGTGAGGAGAGGACTGGTAGAGTACATGCTGCTAGGAGGTTATTTGAGTACTTACAGACCAATGGCTTGAACTTTCCTGTAATCCATCACATAGATTTCCCCAAAACCATTGACAGAGATGCTCTTGTCATTGGTGCCGGGGCCAATGTTGGTGCTCTCCTAGTCGATGGTCTTGGTGATGGTGTACTTCTTGAAGCTGCTGACCAGGAATTTGAGTTCCTGAGGGACACATCTTTCAACTTACTTCAGGGTTGCAGAATGCGCAACACAAAAACTGAATACGTGTCTTGTCCTTCGTGTGGGCGAACACTCTTCGACCTTCAGGAAATCAGTGCTCAGATTAGAGAAAAGACCTCTCATCTGCCAGGCGTCTCGATCGCTATCATGGGTTGCATTGTCAATGGGCCAGGAGAGATGGCCGATGCTGATTTTGGATACGTCGGAGGTGCTCCTGGAAAGATCGATCTTTACGTTGGCAAGACCGTCGTGCAACGTGGCATCGCCATGGAAGGCGCCACCGACGCCTTGATCCAGCTGATCAAGGACAACGGCCGGTGGGTGGACCCTCCTGCCGAGGAGTAG
Protein:  
MATGVAPAPLPHVRVRDGGIGFTRSVDFAKVLSVPGVGTTRTGSSRGRALVVKCSSTGSDTMELEPSSEGSPLLVPRQKYCESIHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKDVAKTVEEVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCQRLANLGTQAANLQIGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVLMSVSLDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVEDTEARLALKRLVDISMGVLTPLSEQLTKPLPHAIALVNLDELSSGAHKLLPEGTRLAVTIRGDESYEQLDILKGVDDITMLLHNVPYGEERTGRVHAARRLFEYLQTNGLNFPVIHHIDFPKTIDRDALVIGAGANVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAMEGATDALIQLIKDNGRWVDPPAEE